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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Ron Valcourt | 16th | Tyrese Mason | 24th | 24th |
| First Basemen | Tied for 17th | Chris Hernandez | Tied for 8th | Tied for 18th | |
| Second Basemen | John DiPietro | 8th | Erik Woods | 4th | 4th |
| Third Basemen | Léonard Rolland | 9th | Danny Martinez | 10th | 7th |
| Shortstops | Andy Alfonso | 7th | Dustin Black | Tied for 4th | 5th |
| Left Fielders | Tied for 21st | 20th | 24th | ||
| Center Fielders | Alex Gonzalez | 10th | Jim Constant | 6th | 7th |
| Right Fielders | Matt Paul | 15th | Rob Collins | 3rd | 9th |
| Starting Pitchers | Matthew Miller | 19th | Phil Merchen | 5th | 18th |
| Relievers | David Irvegas | 19th | Tied for 21st | 20th | |
| Closers | Danny Perdomo | 14th | Tied for 21st | 18th |
